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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
UVM cis rs10935120 1 rs9814567 chr3:134218557 ANAPC13 chr3:134196547-134204865:- -0.46 -7.06 3.0E-9 Height
UVM cis rs9876781 1 rs9817615 chr3:48470756 TREX1 chr3:48501186-48509043:+ -0.4 -5.1 4.38E-6 Longevity
UVM cis rs10935120 1 rs9819532 chr3:134288644 ANAPC13 chr3:134196547-134204865:- 0.45 6.73 1.03E-8 Height
UVM cis rs10935120 1 rs9826496 chr3:134224437 ANAPC13 chr3:134196547-134204865:- 0.46 7.06 3.0E-9 Height
UVM cis rs10935120 1 rs9827987 chr3:134272621 ANAPC13 chr3:134196547-134204865:- 0.46 6.87 6.1E-9 Height
UVM cis rs10935120 1 rs9828815 chr3:134265749 ANAPC13 chr3:134196547-134204865:- 0.46 6.87 6.1E-9 Height
UVM cis rs10935120 1 rs9829092 chr3:134229866 ANAPC13 chr3:134196547-134204865:- 0.47 6.95 4.49E-9 Height
UVM cis rs10935120 1 rs9832785 chr3:134213070 ANAPC13 chr3:134196547-134204865:- 0.46 7.06 3.0E-9 Height
UVM cis rs10935120 1 rs9834755 chr3:134206845 ANAPC13 chr3:134196547-134204865:- 0.47 7.01 3.68E-9 Height
UVM cis rs10935120 1 rs9835204 chr3:134261342 ANAPC13 chr3:134196547-134204865:- 0.46 6.87 6.1E-9 Height
UVM cis rs9876781 1 rs9838618 chr3:48487353 TREX1 chr3:48501186-48509043:+ -0.39 -5.2 3.06E-6 Longevity
UVM cis rs10935120 1 rs9841212 chr3:134191938 ANAPC13 chr3:134196547-134204865:- 0.46 6.56 1.98E-8 Height
UVM cis rs984222 1 rs984222 chr1:119503843 WARS2 chr1:119573841-119683295:- -0.53 -5.37 1.63E-6 Waist-to-hip ratio adjusted for body mass index;Waist-hip ratio
UVM cis rs9876781 1 rs9849509 chr3:48483432 TREX1 chr3:48501186-48509043:+ -0.4 -4.9 8.74E-6 Longevity
UVM cis rs10935120 1 rs9850015 chr3:134269541 ANAPC13 chr3:134196547-134204865:- 0.46 6.87 6.1E-9 Height